When a huge alien probe enters the galaxy and begins to vaporize Earth's oceans, Kirk and his crew must travel back in time in order to bring back whales and save the planet.

Having escaped capture by the Klingons, a damaged Starfleet reconnaissance probe crashes undetected on the planet Pahl III. Hikaru Sulu, serving as first officer on the retrofitted USS Yorktown, is sent by Admiral Nogura on a secret mission to help locate the missing spy drone. The rediscovered and completed student fan film made with George Takei.

The starship Enterprise and its crew is pulled back into action when old nemesis, Khan, steals a top secret device called Project Genesis.