Heidi is five years old when her aunt Dete, who has raised Heidi since her parents' deaths four years earlier, takes the orphaned Heidi to live with her formidable grandfather in the Swiss Alps. The American feature-length adaptation of Heidi (1974), the Japanese anime series produced by Zuiyo Eizo.

The story takes place in the year 2034, two years after the events in Ghost in the Shell: S.A.C. 2nd GIG. Female cyborg Major Motoko Kusanagi has left Public Security Section 9, an elite counter-terrorist and anti-crime unit specializing in cyber-warfare, which has expanded to a team of 20 field operatives with Togusa acting as the field lead.

Nishimura Gosaku, an aspiring photographer who loves mountain scenery, meets a boy named Sada Ichiro one evening who asks to borrow train fare. For some reason, Ichiro follows Nishimura everywhere. When told to go home, Ichiro refuses, claiming he doesn't want to return because of his estranged parents. Reluctantly, Nishimura lets Ichiro stay the night. The next day, Nishimura takes photos of Ichiro by the Sumida River, and they part ways on good terms. Meanwhile, Ichiro's worried father, Shigeo and mother, Fujiko, desperately ask Ichiro's classmates and tutoring teachers for his whereabouts, but no one knows where he is. Suddenly, Shigeo receives a phone call demanding a ransom of 10 million yen.