Less than a year after Geist activated the Death Force, which decimated most of Jerra's population, he has kept himself busy by dismantling the Death Force machines one by one. Most of the remaining human population have fled to a remote haven run by a warlord named Krauser. Krauser is another MDS unit, MD-01, who has a technology that hides his mobile fortress from the Death Force.

The story is set in a village in the southern Japanese prefecture of Kōchi during World War II. Even in this remote mountainous area, the perception of American and British people as "brutes" has taken root, due to the deaths and injuries among the villagers' relatives. A elementary schoolgirl named Eiko transfers from the city of Yokohama to this village. Eiko happens to have blue eyes from her American father, and her classmates make no attempt to rein in their bullying. Other than Eiko's homeroom teacher Akiko, even the teachers view Eiko the same way that the children do. However, a boy named Kenta views Eiko more with curiosity than with hostility. The children's lives change as the injured father of one of Kenta's classmates returns from the battlefield and news of more casualties arrives in the village.

June and Naomi, by day they're Radio DJs, by night they're the crime fighting Siamese Cats.

The film begins with the Shinkengers defeating the Ayakashi Demebakuto. As he assumes his second life, he captures the Shinkengers in mirrors as he sends them into a series of different dimensions (all different film genres) in order make them suffer for his amusement before actually killing them. First, the Shinkengers appear in the jidaigeki Lord's log of Notable Events, fighting a group of samurai, shortly followed by a Western showdown between Genta and Ginshirō, the owner of the rival sushi stand Silver Zushi, over whose food is better in Wild Grip. Then the scene changes again to the cop drama Passionate Version with the vassals as cops while Takeru is being held hostage as the Shinkengers starts to realize that something is wrong.

Genta finds a starved member of the Nanashi Company who tells Genta that he has run away from the Rokumon Junk after being sick of his Company being abused by the stronger Gedoushu. Feeling sorry for him, Genta takes him back to the Shiba House and tries to get him a job

A year after defeating Yogoshimacritein, the Go-Ongers head to the wild western realm of Gunman World to defeat Gaiark's Pollution President Batcheed in a final confrontation. However, after defeating Engine-Oh G9, Batcheed opens up a dimensional rift that sucks the Go-Ongers and Engines to other Braneworlds. Soon after, while finding themselves fighting Ugatz, the Shinkengers encounter Go-On Red as he helps take out the Ugatz on his own, much to the Shinkengers' shock.

Taking place in between Shinkenger Acts 22 and 23, the Shinkengers battle the newly revived Kusare Gedoushu Aburame Manpuku and his army for three days. The wounded and tired Shinkengers nearly lose, had the Kusare Gedoushu not needed to regain energy by soaking in the Sanzu River. As their wounds are treated, Jii reveals they he has found the Secret Disk used by the first Shinken Red to seal Manpuku at the Genryu Temple, which lies in the middle of Kusare Gedoushu territory.

A live show that was performed across Japan in March and April of 2010, acting as a final farewell for the cast. It comprises two parts: a scripted show part, and a talk show with the cast. The Goseigers also appear.

The director's cut version of Samurai Sentai Shinkenger's first two episodes, which was first released on DVD on August 6, 2010. It was re-released on Blu-ray Volume 1 on February 7th 2014.

The film features the remnant Ayakashi who seek to revive Dokoku Chimatsuri, but instead revive the Goseigers' nemesis Buredoran of the Comet as the Gedoushu Buredoran Chimatsuri. To make matters worse, Takeru Shiba has been brainwashed into serving Buredoran as Gedou Shinken Red.